FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001319821

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001319821
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4221158
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT150110.35561331748302244No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT128650.30477418755706376No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT59860.1418094276499482No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)