FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001320016

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001320016
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3346291
Sequences flagged as poor quality0
Sequence length100
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA44930.13426805977125122No Hit
ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA44750.13373015078485403No Hit
TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA37010.11060006436977537No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)