FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001320279

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001320279
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1574945
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT43730.27766048973138746No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT36810.2337224474505459No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20070.12743302147059105No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)