FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001320330

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001320330
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATTTATTATGGGCAATGCGATGCCGCAACTGCGCGCGGAGCTCCCGCAT22.4390243902439024No Hit
GCAGTAACTCTACCAGTACTTTTCCTATATGGGTTCTCAACCAGCCCTCA11.2195121951219512No Hit
TCATTATACTTTTTACCACACACACAAAAAAAATGGTGGCAGAAAATCTG11.2195121951219512No Hit
ACATGGGATAGCGAGACCCCGTTCTCCAGAAAAAGGAAAAAAAAAAAACA11.2195121951219512No Hit
CTCCTGTAGACTGTGAACTACACCTTCTACCCCCGCAGAAAGTAAACTGT11.2195121951219512No Hit
TCTCTTACATCAAACCCGTCCTCGTCCTTGGCAATTGTTCTGGTTCGCTT11.2195121951219512No Hit
AGGCCTTACGAGGCGGGAAAACTCAAATGTGATGGCCCCCCTAATGTCTC11.2195121951219512No Hit
ACATCTAGGTGTGCATACTTTTAAAAAATATGCTTGTGAATTGTTGGGAT11.2195121951219512No Hit
CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG11.2195121951219512No Hit
CTTCATATTCAACCCAAGGGGCGTGAAAACATCAAGTAAATACCAAACCG11.2195121951219512No Hit
GAATCAACGGAGAGCACTTTTTTTTTTGTTCCTTTTTTGCAGCCCACCGG11.2195121951219512No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTCCTCCCC11.2195121951219512No Hit
GCTCCGCGCGCAGTTGCGCCATCGCATTGCCCATAATAAATCTGCTACCG11.2195121951219512No Hit
CTATAGACAAATGCCTGCAACAACGCAGGGATCTCTTTCCCGGTAAACCA11.2195121951219512No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCT11.2195121951219512No Hit
GCATTGCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATC11.2195121951219512No Hit
GTATTAGGTTTCACTTCAGCTCAATGTGGTGGCCACATCACATCATGGTC11.2195121951219512No Hit
GAGTAACTGTTTTCAATTTCTTTAGGTCCATACCCCCCAAAAGAGTAGAA11.2195121951219512No Hit
CCCTGAGCCCGTAGGGTTTTCATAGTGGACAAAGAACTTGTGGTCTTTTA11.2195121951219512No Hit
ATATTAAACAGTGTATTGGAAGATAGATTAACTAATAGCTCCAAGCCTCC11.2195121951219512No Hit
GATTAATGTTTGGGTCTGAGTTTATATATCACAGTGAGAATTCTATGATG11.2195121951219512No Hit
ATGTTAGTGCCTAATTACTTGACTAAAATTTTAAATTCTTTTTTCTGTGT11.2195121951219512No Hit
TCACAAAAGGGCGTGCAATCGCGCAACGACAAACCTAAATGTTGGGTCAG11.2195121951219512No Hit
CATCTCCAGCGCATGACGCCCCGTGGCAAAAGTGAGGGTAATGTCGCGTT11.2195121951219512No Hit
GTACTGTAATTAGAAAATTTTATCTCCATGTGTAAAATAAAATAGTTGAA11.2195121951219512No Hit
CTTCTCCACATGATACATAAGTTCAAGGTCCAAAGTTCCTATCACAATTT11.2195121951219512No Hit
CCTTTATATGTGATGTGTCATTTTGCTCTGGCTGCTGTCAAGATTTTCTT11.2195121951219512No Hit
GCTAATTTTTGTATTTTTAGTAGAGACGGGATTTCACCATGTTCTCCAGG11.2195121951219512No Hit
CCGGTAAATGCGGGAGCTCCGCGCGCAGTTGCGGCATCGCATTGCCCATA11.2195121951219512No Hit
GTCTATGCTCTGCTTCAGGCTCTGAATTCTTTCCTGGCTAAGAATTTTCA11.2195121951219512No Hit
GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC11.2195121951219512No Hit
AGACACTATTGAGTGTGGCGCCTTACACCTTTTTTTACCCAGTCATATCT11.2195121951219512No Hit
GCAGAATAGTAATGAGGATGTAAGTCCGTGGGCGATTATGAGAATGACTG11.2195121951219512No Hit
CATTGACGGTGCTGACCCAACATTTAGGTTTATCGTTGCGCGATTGCACG11.2195121951219512No Hit
TTCCAGATTTCCACTTCAAACTTCTATCTTCTCCAAATTGTTTCATCCTA11.2195121951219512No Hit
GCAATAATCCCCATCCTCCATATATCCAAACAACAAAGCATAATATTTCG11.2195121951219512No Hit
GCTGGTAGGCCATCGGGTGGATCTTAAAACCGTAGAGCCTGGGAACCAAC11.2195121951219512No Hit
GGCGAGGCGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAG11.2195121951219512No Hit
GTGCACGCTCGCCTAATGCTTCGTAGAGCTGGATCTGCAAGCGTGTAAGA11.2195121951219512No Hit
GTACATGGGGTAATGCGTTGAGGGAGACATTGTACGCCTCGCCCAACATG11.2195121951219512No Hit
CGTGCGGCAGCGCATTCCCAACACTCACCCTGCTCACGGCGGAGACCAGC11.2195121951219512No Hit
TAATTAGGCTGTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAA11.2195121951219512No Hit
GGACTAGGCACACACAAACACATGTTTTCATGCAAAAATCGAACCTAGAA11.2195121951219512No Hit
ATGCTGGCACTCCACATACCTCGGTTTTTAGTGGACAATCTGATAGAAGC11.2195121951219512No Hit
GTAGTATAATGTTGTGCAGCAACTCTCTGTAGTTTATTCGTTTTGCTTAA11.2195121951219512No Hit
TCTTAATACAGTTCATAAGAATGAATGTATACAGAGTATCTTTTCCAACC11.2195121951219512No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC11.2195121951219512No Hit
CCGCATTTACCGGTCATTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.2195121951219512No Hit
CCTCTCTACTTTGGCGCGACTGCGTGAACGCGACATTACCCTCACTTTTG11.2195121951219512No Hit
GGTCAGCGCATCGCATGAAGCGCCCTGAAACGAAACGCCCTGGCACACTT11.2195121951219512No Hit
TTTTTTATGAGGAAAACCCGCCAATGCTGTCGGGGCTGAGGGATCACACG11.2195121951219512No Hit
GATTTCTTACGTAGGGATATTGAGGCTGAGATGAGTGAGGGATAGTTTCT11.2195121951219512No Hit
GCCACTGCGGCCGGCATCTTTGTATTTTCTCGTTGAGGCAAAATGCACAT11.2195121951219512No Hit
GGCAGGGCACCCCGAGAACCCGAGGCCGGGGGGGCTGATCATGAGGGAGA11.2195121951219512No Hit
GATGTCCATTCTCCCCACAATGACATATGATTCCAAACAAAATCCCCAAA11.2195121951219512No Hit
ATGCAGGTGGATTCCTTCAGGTCTTTCCTTTGGTTCTTTGAGCATCTTTG11.2195121951219512No Hit
ATCCGCTACCGACGCTGACTAACATTTCGCGATCGATCATTGCATCACCA11.2195121951219512No Hit
CAGTTCTCCTGCCTCAGCTTCCCGAGTAGCTGGGACTATAGGTGCACACC11.2195121951219512No Hit
GGGTAACATAAATATCTGGATCAATATTCTAGTTCTGGGCAATTATCCTG11.2195121951219512No Hit
AAGATGAGCTGGAGGACCGCAATAGGGGTAGGTCCCCTGTGGAAAAAGGG11.2195121951219512No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCGGA11.2195121951219512No Hit
GAGCTGAGGGATCGCTTTTCCTATATTCTATAGGATTCCCCAGCCAACTA11.2195121951219512No Hit
ACCTGACCCGCCCTTTTGCCACGGAGCGTCATGCGCTGGAGATCCAGCAT11.2195121951219512No Hit
CTGCTCAGCTGAGTCCCTAATGGGGTAGCAGGCTATATGCAGATAGGAAC11.2195121951219512No Hit
ATGAAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA11.2195121951219512No Hit
GTATCAACGCAGAGTACATGGGCGTAAAAAAAAAAAAAAAAAAAAAAAAA11.2195121951219512No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.2195121951219512No Hit
AAATAGATCAGGAGATGTGGAGACTGCCCTGGCTTCTGCAGGTACCAATC11.2195121951219512No Hit
ACGATGACCCTCAATGTTGAGTCCGCATCGCCAATCCAGATCCTTTCTTG11.2195121951219512No Hit
TGCTTCCCCTTTGATGACTCCTCTACTACCTAAAAATCCTCACTTCTTTG11.2195121951219512No Hit
CCAAAACTGTCTGCAGACATTGCCAAACATGCTCTGCGTGACTGCCCTAG11.2195121951219512No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAACAT11.2195121951219512No Hit
GATCATGTTAAAGCAAGATTCATCGGTCCCTAGTCTCCCTTCACCAGCTT11.2195121951219512No Hit
GGTCTAACGTTTAAGTCTTTAATCCACCTTGAATTAATTTTTGTATACAG11.2195121951219512No Hit
GACCAAAAGTGTTTCAGATTTTAGATTTTTTCCAGTTTTGGAATAACTGC11.2195121951219512No Hit
ACATTTAGGTTTATCGTTGCGCGATTGCACGGCCTTTGGTGATGCGATGA11.2195121951219512No Hit
GGATGATTTCTAAACATGGAAAGGGACAGGTGAAGTAAAAACAACAGAAC11.2195121951219512No Hit
CTTTTGAATACAATGAATGTGGGAAAGGTTTCACTGAGAATTCACTCTTC11.2195121951219512No Hit
TGGTGTACAGGTCCCCGGAGGCATCCTGGCTGGGTGGGAAGTTTCTGGCG11.2195121951219512No Hit
CGGCTTGAACCCAGGGGGTGGAGGTTGCAGTGAGCTGAGATCGCGCCACT11.2195121951219512No Hit
GTTTTTTCCTAGTGTCCAAAGAGCTGTTCCTCTTTGGACTAACAGTTAAA11.2195121951219512No Hit

[OK]Adapter Content

Adapter graph