Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001321753 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3540871 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 13784 | 0.3892827499222649 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 11101 | 0.3135104328850162 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 5570 | 0.15730592840010268 | No Hit |
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT | 5560 | 0.15702351201159262 | Clontech SMARTer II A Oligonucleotide (95% over 24bp) |
TCTATAGGGTGATAGATTGGTCCAATTGGGTGTGAGGAGTTCAGTTATAT | 3606 | 0.10183934969672716 | No Hit |