FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001321811

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001321811
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4156092
Sequences flagged as poor quality0
Sequence length100
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT65030.15646910607368655No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50500.12150837854407456No Hit
TCTATAGGGTGATAGATTGGTCCAATTGGGTGTGAGGAGTTCAGTTATAT43030.10353476294557484No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)