FastQCFastQC Report
Sat 3 Sep 2022
EGAF00001321916

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001321916
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences602721
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9400.15595939082925597No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT8170.13555193862500228No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)