FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001321924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001321924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences149212
Sequences flagged as poor quality0
Sequence length100
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2010.13470766426292793No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1970.13202691472535721No Hit
GTCTATACCACTAGTAATGTAAGATAGCAACTGAAAAAAAATCCTATTTA1560.10454923196525749No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)