FastQCFastQC Report
Sat 3 Sep 2022
EGAF00001321978

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001321978
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences653252
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT32030.4903161413971943No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT25290.3871400317182343No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16010.24508153055788576No Hit
CTTATATACTGCTGGTGGGAATGTAAATTCAGCCATTGTGAAAAGCAATG7270.11128936459436788No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)