FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001322102

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001322102
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1602350
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT41040.2561238181421038No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT28610.17855025431397634No Hit
CATCAATAGATGGAGACATACAGAAATAGTCAAACCACATCTACAAAATG20180.12594002558741849No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN19470.12150903360688989No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)