FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001322108

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001322108
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1589297
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT132140.8314367924937881No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT87120.5481668939159893No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT56020.35248289023385815No Hit
CATCAATAGATGGAGACATACAGAAATAGTCAAACCACATCTACAAAATG17380.10935652681657362No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)