FastQCFastQC Report
Sat 10 Sep 2022
EGAF00001322119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001322119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2321035
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT120780.520371299872686No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT86760.3737987578817209No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT54290.23390427115489426No Hit
CTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGT34390.1481666584088564No Hit
CATCAATAGATGGAGACATACAGAAATAGTCAAACCACATCTACAAAATG30090.1296404405793105No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)