FastQCFastQC Report
Sat 10 Sep 2022
EGAF00001322120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001322120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2321035
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT108020.46539582556919645No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT71460.30787988979054604No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT45050.19409444493512593No Hit
CATCAATAGATGGAGACATACAGAAATAGTCAAACCACATCTACAAAATG27630.11904172061170987No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN23850.10275588261271372No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)