FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001322799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001322799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2611711
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT46080.17643606049827107No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT43160.16525565041461326No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT37460.14343087730610316No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)