FastQCFastQC Report
Wed 31 Aug 2022
EGAF00001323205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001323205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length100
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTTTATTAAAATGTAGATTTCTAAGCTCAATCTTTAAACATTCTGGTT15.88235294117647No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTGAAAAAAACTCC15.88235294117647No Hit
TGGTTACGCTGAATGCACTCTCCCAGGGTGCATAGGCGCTGCTGAACTGC15.88235294117647No Hit
CTGTTAGAATGGCTTTTATCCAAAAGATGGGCAACAACAAATACTGGTGA15.88235294117647No Hit
CTCTCCCACTTCACTAATTATCACTTAAGTTGTGTCTAATATGTTGTTAA15.88235294117647No Hit
GTAGTGTGTTTTAGAGGAAGTCTAAGCACACTTTTCATAATAGTAATTGT15.88235294117647No Hit
GGTAGTGTCAGTTCTCCAACTTTGTTCTTCTCCTTCAATACTGTGTTAGA15.88235294117647No Hit
GCCTCAGTTTCTATTGCAATAAAATACTGGCATCATCTCAAGATTCTCAG15.88235294117647No Hit
GAAGTATATAATTGAATTAACATAAAGGAAAATACTGAATAAAAAACAGA15.88235294117647No Hit
GAATATACTTCATTCACTAATAATAGACTGGTGCTGTAACTCAAGCATCA15.88235294117647No Hit
ATAATCACCTGAGCAGTGAAGCCAGCTGCTTCCATTGGTGGGTCATTTTT15.88235294117647No Hit
GGATGGCACTTTATTGGTGCTCGACCATCATTTAGGTGAGAAAACCCTCT15.88235294117647No Hit
CATGATGCATGTGGTTCATGACCAGCTGCTTCCCACCGAGCTGCTCGATG15.88235294117647No Hit
CCACTAAGCATATTATCAGTAAACTATTAACTGACTGCACATTATGTAAT15.88235294117647No Hit
GTATATAACTTCAATGGCCAGTCTGAAAAATCAGTATTTCAGAGAATCTA15.88235294117647No Hit
GACTGATGTAAAACATGTGAAGAAAACCCATGAAGCTGCAAGGGAGCATT15.88235294117647No Hit
ATACAAGAAAGACATGTAGGAGGATTGGAAACGATTAGGATGTATTTTAA15.88235294117647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)