FastQCFastQC Report
Wed 31 Aug 2022
EGAF00001323206

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001323206
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length100
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAACAATAATTACAGTAGTGCCATCAGAGGTATGCACAGGAGCCTTCAT15.88235294117647No Hit
GCTAACATGCCTTGGTTCAAGGGATGGAAAGTCACCCGTAAGGATGGCAA15.88235294117647No Hit
CCACAGGACCTATTGCCAAGGAAGACAAGGCACAGGACCCATTGCCAAGG15.88235294117647No Hit
ATTTCAAGCAAGTTCTCTGAAAATTTTGCCATTTATCTACAGAAATTTGA15.88235294117647No Hit
GTAGGAAATTGAGTTATATAAAAGATTTATATTTTGTTTCATATAACCCA15.88235294117647No Hit
GGTTGCGGAGAGCTGAGATTGTGCCACTGCACTCTAGTCCCAGTGACAGA15.88235294117647No Hit
CTCCCAAATTGCTGGGACTATAGGCTTGAGCCACTGTGCCCGGCCACAAT15.88235294117647No Hit
TCTACATACTAACATTATTTTGCCATTCAAGAGTCAAATTTGTAAGACTC15.88235294117647No Hit
ATACTGTGATCTAGGTCTTAATTGCAAGCCATACTGAGGATTTTTTTTTT15.88235294117647No Hit
GACTCAGAGCTTCCACACATGGATATCTGAATAAGGTGCACTGACAAAGA15.88235294117647No Hit
GAATGCACGCGCGTTCCGTTGCCGGTAATCAAATACGCATCCAGCGATAG15.88235294117647No Hit
ACAACCTCCTGTTCTATCCATGTTGTTGCAAAGTAAAGGAGCTCATTCTT15.88235294117647No Hit
AGCTTACCCATCAACCCGTCAGTGAAAAATTAGTGTTGGTAAACCACTGA15.88235294117647No Hit
GTCAACTGGCAATCCTATCTTCAGGGACAGATGATTTCTGCTGAAGATTG15.88235294117647No Hit
GTATTCAGTGACTGTTCATGGCATAACCATTCCAGACTTTAAAAAGCAAG15.88235294117647No Hit
TCTATGTAGTATATCCAAACAGCTTTAAAAAAAATGGTAAGCAATTTATG15.88235294117647No Hit
TGCAAGATGTGTGTGTAACTTTATATATTAGTTTACAGATAGACGTGATG15.88235294117647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)