FastQCFastQC Report
Wed 31 Aug 2022
EGAF00001323207

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001323207
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATACAACAACAACAAAAATAAAACTACAGGCCAATATTCCTGATGAAC16.25No Hit
TGTCTATAGCGGTTTTCGTTATCAGATAATCGATGTCAAAAAAATGCCAC16.25No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG16.25No Hit
GGTATCCCATTGCTGATACAGCACTAGCTCCGCGACATCCGCAGGTAAAT16.25No Hit
CATTAGGCGAGCGTGCACATTTGTGTTTTTCCGCCACGGATTGCCTCGAA16.25No Hit
CGCCAAAGTAGAGAGGGTTTTCTCACCTAAATGATGGTCGGGCACCAATA16.25No Hit
CTACTACACTGTGAATGATCACTGTATTTATTTCGTGAATGAGATCTAGA16.25No Hit
CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG16.25No Hit
AGCATGCATATCTTCAATGACGACGGTTGGTTTACCGGGAAAGAGATCCC16.25No Hit
CTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAAA16.25No Hit
GCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAG16.25No Hit
CGCTATAGACAAATGCCTGCAACAACGCAGGGATCTCTTTCCCGGTAAAC16.25No Hit
GTAATGTCGCGTTCACGCAGTCGCGCCAAAGTAGAGAGGGTTTTCTCACC16.25No Hit
AAAACATAAATGTGCACGCTCGCCTAATGCTTCGTATAGCTGGATCTGCA16.25No Hit
ACAATGAACATTGATGTTGAAGAAAAACTACAGTACATGGATATAGCTAT16.25No Hit
CCTTGGCGCCTGCCTGATCCTCCAAATCACCACAGGACTATTCCTAGCCA16.25No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)