FastQCFastQC Report
Fri 2 Sep 2022
EGAF00001323219

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001323219
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences242471
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT15100.6227548861513336No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10330.4260303294002169No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10280.42396822712819265No Hit
ACTTAATACAGTGAGAAATTTGGACTCTCGGATGAATCAACTGGAGACAA3030.12496339768467157No Hit
GTATTAAGTATCTCGTTCACATTCAGAGCAAGTGACTGGACACTGGTGAC2590.10681689769085788No Hit
GTGTTACAGTGTCCTAATGCAGGCATGGATAGTGACTTGCAAGTGCATGA2580.10640447723645304No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)