FastQCFastQC Report
Fri 2 Sep 2022
EGAF00001323226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001323226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences272792
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTAATACAGTGAGAAATTTGGACTCTCGGATGAATCAACTGGAGACAA4050.14846476436259126No Hit
GTATTAAGTATCTCGTTCACATTCAGAGCAAGTGACTGGACACTGGTGAC3220.1180386521598874No Hit
GTGTTACAGTGTCCTAATGCAGGCATGGATAGTGACTTGCAAGTGCATGA2730.1000762485703393No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)