FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001323537

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001323537
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2773381
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT37950.1368365904287943No Hit
GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG34050.12277433212385892No Hit
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGT28800.10384436902106131No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)