FastQCFastQC Report
Wed 31 Aug 2022
EGAF00001324364

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001324364
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAACTCTCCTTGCAAACGAAGGCTGAAGATCAAGAATGACATTCTCA19.090909090909092No Hit
GGCAACGGAACGCGCGTGCATTCTCTGGAAGGTGAACTTTTACATCGTGA19.090909090909092No Hit
GTATAGATGTAGTCATAAAAAAAGAAGTCTAAAGTTGAACTATGAAGGCC19.090909090909092No Hit
CTTCTGATAGTGAAGATAGAAGAGGAAGAATTTATCCATGGGCAGGACAC19.090909090909092No Hit
TCTCTACTTTGGCGCGACTGCGTGAACGCGACATTACCCTCACTTTTGCC19.090909090909092No Hit
CATTTATGGCCAAAGGAAAAAAATGAATAGTTTTTAATAATGAATTCACT19.090909090909092No Hit
CTATATGTATGTACTTTATCACAAAGTGGCCTTTGGGGAGAAAGTCATGT19.090909090909092No Hit
GATGTCAACATCGCAGAGGAAGATGTCCATGAGGTCATGGCCTGCCTCCT19.090909090909092No Hit
GGGTTAATCCGACCATGAGCTCTGTAGGTCCGGCGGCGCATCTTAGGTGC19.090909090909092No Hit
ATGTCGCGTTCACGCAGTCGCGCCAAAGTAGAGAGGGTTTTCTCACCTAA19.090909090909092No Hit
ACCTAGTTTATGATGACTTGAAACAAAACAAATGCCCATAAGGAAAAAAG19.090909090909092No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)