FastQCFastQC Report
Wed 31 Aug 2022
EGAF00001324367

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001324367
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCTCCGCTTCCAGAAGGAGTTAGAGCGGCAGCGCCTTCTGCGGTGCCC13.571428571428571No Hit
GTAGAGTTTGAAGTCCTTGAGAGAGGATTATGATGCGACTGTGAGTGCGT13.571428571428571No Hit
GTACATGGGGGTGTCCTTGCCAGGGGAGGTGACGGGCAGAGCTGCAGGCC13.571428571428571No Hit
GCAGCAGGCAAAGAGAGAGCTTGTGCAGGGAAATTCCCATTTTAAAAATC13.571428571428571No Hit
GCTAAATACTTTGACGCCGGTGGGGATAGCGATGATTATGGGAGCGGAGG13.571428571428571No Hit
AAATACTCCCATAAGAAGTTAAATATGGGAGGAGAAAGAATACATCGGTT13.571428571428571No Hit
CAGAGTACCTGGGTGTTCCCCACCTTGGGCATCATGCACCACAACAAACA13.571428571428571No Hit
CTTCAGGGCCATGAAATAGTAATGGATGTTTTTGTTTCGTGCATACTCCT13.571428571428571No Hit
TAGAGGTGGTCGTCGGGGGGCGTGCGGCGAGCGGGGCGCCACGGCCAGAC13.571428571428571No Hit
GAGTCATTTTTACCACACAGTCCAGTTTGCATGTATAGCTAGGAAACATG13.571428571428571No Hit
GGTATCAACGCAGAGTACATGGGGAGTAGCCATGGCGGCCATGAGTTTGT13.571428571428571No Hit
CACGACGATCTTACACGCTTGCAGATCCAGCTATACGAAGCGTTAGGCGA13.571428571428571No Hit
ATATTAGACTCCTTCGACCCATGTTATATTGAAGTTAAATAACTCTAGTA13.571428571428571No Hit
GTACCTTCACAGAACACTTGTATCGAATTATTCAACATCTTGTTCCAGCA13.571428571428571No Hit
CTTTTGGGGGAACACTGACCTCTGATACTGCTGTGGTCACATTGATCCCT13.571428571428571No Hit
GACATCAAGCCAACCGAAAAGGACCAGACCCAAAAGGCCGGGCACAACCA13.571428571428571No Hit
TGGCACAATTAGCCTCAAAATCCATTCCAAGTTGTATATTTGTTTTCCAA13.571428571428571No Hit
GAGTACATGGGATTAATCCCCTGGCCCAACCCGTCATCTACTCTACCATC13.571428571428571No Hit
ATCTCTATCAACTAAAAGAATTAGTCTAGAAGTTTTAAAGGTCACAGTTC13.571428571428571No Hit
CTGTATTAGATTGCCATCAGCAATGGATGAGAGCTCCAGTTACTCCCTAT13.571428571428571No Hit
GGCCCACTGGGTCCAGGGAGGCGAAAGCGCCCCTCCTTCTCCGTCTTCCT13.571428571428571No Hit
ATATTTAGCATGTTTCAAAACATTTAAAATAGGAGCAGAACATTTTACAA13.571428571428571No Hit
GGATTGGATTGGGAAAGTGCGAAAGGGAGAAATCAAGAGTGATTTCTAGG13.571428571428571No Hit
ATATAATCTAAGAGCCTCCCGGGGCAGACTGCAGGCTAGAGAAGGTTTAC13.571428571428571No Hit
ACTCAGGGGAGGCCAGGAAGGCCTTGAGCTTGGGCCGGGCGCTGAGGCGC13.571428571428571No Hit
CTTAGAAGCAACTCCTTGGCCCAGGAATGCGTGACCCCTGAGATGGGTCC13.571428571428571No Hit
CCCTTGTACCAACAGCCCCTTCCCTCCCAAGTTAGGTGAGCCCTTGGGCC13.571428571428571No Hit
CATCACAGCCCATGACAGTACTGAAAGAAAATGTCATGCTGCAGTCACAA13.571428571428571No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)