FastQCFastQC Report
Fri 9 Sep 2022
EGAF00001324465

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001324465
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2065875
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA32250.15610818660373935No Hit
ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA31850.1541719610334604No Hit
TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA25620.12401524777636594No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)