FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001324656

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001324656
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2803049
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT47880.17081399575961748No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40900.14591254023743433No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT28470.10156797116283019No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)