Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001348511 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 26401947 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 676726 | 2.563167027037817 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 189381 | 0.7172993718985953 | Illumina Single End PCR Primer 1 (100% over 50bp) |
ACCACCGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGT | 144396 | 0.5469142105315188 | Illumina Single End PCR Primer 1 (100% over 43bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGGGTAGATCTCGGTGGTCGCCG | 35704 | 0.13523245084917412 | Illumina Single End PCR Primer 1 (98% over 50bp) |
CCGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTC | 28994 | 0.10981765852344147 | Illumina Single End PCR Primer 1 (100% over 47bp) |
CGGCGACCACCGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATC | 26768 | 0.1013864621423564 | Illumina Single End PCR Primer 1 (100% over 38bp) |