Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001416154 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21352256 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 36 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC | 49822 | 0.23333365804531378 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGC | 42289 | 0.19805401358994573 | TruSeq Adapter, Index 2 (100% over 50bp) |
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT | 39260 | 0.18386815894301756 | No Hit |
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA | 31313 | 0.14664960929655396 | No Hit |
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT | 24672 | 0.1155475093591984 | No Hit |