Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001416167 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19922201 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 36 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC | 43691 | 0.2193080975340024 | No Hit |
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT | 40618 | 0.2038830950455725 | No Hit |
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA | 29779 | 0.14947645593978295 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGC | 24632 | 0.12364095714123154 | TruSeq Adapter, Index 5 (100% over 50bp) |
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT | 22679 | 0.11383782344129548 | No Hit |