Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001416192 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12922642 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 35 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC | 30652 | 0.2371960780156256 | No Hit |
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT | 17421 | 0.13480989413774674 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGC | 16860 | 0.13046867660653294 | TruSeq Adapter, Index 11 (100% over 50bp) |
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA | 13634 | 0.10550474121313583 | No Hit |