Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001420615 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 20888 | 0.5222 | No Hit |
CTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGT | 15254 | 0.38135 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 13162 | 0.32905 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 9963 | 0.249075 | No Hit |
ATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTT | 7350 | 0.18375 | RNA PCR Primer, Index 39 (95% over 23bp) |
ACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTTCT | 4357 | 0.108925 | RNA PCR Primer, Index 39 (96% over 25bp) |