FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001420818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001420818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73072
Sequences flagged as poor quality0
Sequence length100
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGAGGCCACCTTCCTTCTGGCAGGGACTCTTATTTATTCCCAT2810.38455222246551346No Hit
GCCTTGGTACAGTGCGCCTGGGTTTGTCAAGGCTGCTGCTACAAAGCTGG2710.37086708999343115No Hit
GTACATGGGAAACCTCATTTTTTTTGTTCCTTTTCTTGTTACTTTTAAGA2690.36813006349901467No Hit
GCTCTAGGGCTTTCGGTTTCCCCTTCTTCCGGTAGGCCGCGTAGAGGCAT2190.299704401138603No Hit
GTACATGGGAAGGGCACAAGTCCTGGATGTTGTGTGTGTCGAGAGGCCAA2130.29149332165535363No Hit
GTACATGGGCAATGGTCAGTCTTTTCCTGGCCAGAGGAAAGATTGATGGC2090.2860192686665207No Hit
GGTATCACCATCTGACATATTTTCCCTTTTCCGGCGTTGTAGTAGCACTG1870.25591197722793957No Hit
GGGTAGGAGCACATGATGCATCCTTCAGCCACTGCAACCTCCAGAGGGAC1820.2490694109918984No Hit
GTACATGGGGGTTGGAGAAAGGAGAGAAAGGAAAGCGCGAGGAGCCGCCG1800.2463323844974819No Hit
GTACATGGGGAAGCCCGGAACTGCTGGGCCACCCGTGGTCTCTGTGTCCT1740.23812130501423254No Hit
GTACATGGGACAGCCCGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGA1730.2367527917670243No Hit
ATATAATTCCACAGGAACCTCATCACCACTCTCAGTTGCACTGGTATCAC1650.22580468578935844No Hit
CTTTTAATGTGATAACTTTCCACACCCTCTCCACGTAGAGGCACAAAGGA1600.21896211955331726No Hit
CCCTGGTACCGTGTAGTTGCCGAAGTCCAGATCTGCCATGGCAAAACGGA1550.21211955331727608No Hit
CATTTGGCCTCTGTGACCCAGAAAAGCGGTAGAGCAGGGTAGGAGCACAT1540.21075104007006787No Hit
GCCATAACATGGGGAGAAGTCCTGCGCTCTCCATTTCTCCATCGCTGGCT1520.20801401357565139No Hit
CTCTTGAAGCAGTTAAAGTAATTGATGTTGGAGTATGCTGAAATGCAGTA1500.20527698708123496No Hit
GTTTATTAATATTTGGTGACAAAAGAACTTAAATTGACCGAAAATCAAAA1490.2039084738340267No Hit
AGCTAAAAGAGCAAGAGTACACATCAACAAAAATGGAAACAAGGCTTTGG1390.19022334136194438No Hit
TCTGTATATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGA1380.18885482811473617No Hit
CTCTTATTTATTCCCATTGCTCTAGGGCTTTCGGTTTCCCCTTCTTCCGG1380.18885482811473617No Hit
ACATGGGACAGCCCGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGATG1380.18885482811473617No Hit
CATATATAGTATGTCTCCATCAAGTGAAACTTCATCACCTTTTTACAATT1340.18338077512590323No Hit
ACAGAATACCATCCCCTGGTACCGTGTAGTTGCCGAAGTCCAGATCTGCC1320.18064374863148674No Hit
ATGTTGGAGTATGCTGAAATGCAGTATATAATTCCACAGGAACCTCATCA1290.17653820888986205No Hit
GTTTTATTTCTAGACTTTCATGTTTGTCTTTTTGTCTTCTGCTGGAAACA1230.16832712940661265No Hit
GTACATGGGACACATGATGATGGATACATGATCTGTTGTGACAAATGCAG1180.16148456317057147No Hit
GTCCTGGATGTTGTGTGTGTCGAGAGGCCAAAGGCTGGTGGCAAGTGCAC1170.16011604992336326No Hit
GTATATAATTCCACAGGAACCTCATCACCACTCTCAGTTGCACTGGTATC1170.16011604992336326No Hit
TATTTATTCAATGCTCTCACATTTGGCCTCTGTGACCCAGAAAAGCGGTA1170.16011604992336326No Hit
GTCCTGGAGCTGTGAGGAGATTCGGGCCGTCACCCTGCCTCCCCTGCGTC1160.15874753667615502No Hit
CATATTGACTGCATGGGGATTGATAGGCAGCATATTCCTGATACATATCT1160.15874753667615502No Hit
GTAGTAGCACTGCCCTCTCTTTATCCAAATTCCTAGGCTGACAACGTTCA1150.15737902342894677No Hit
TCATTGGTCTGGTCCCCGTCAAAGTTTCCACAGGCCCCACACAGTTTCCC1150.15737902342894677No Hit
TATTTATTCCCATTGCTCTAGGGCTTTCGGTTTCCCCTTCTTCCGGTAGG1140.15601051018173856No Hit
GTATTGTAGCCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCCGTC1140.15601051018173856No Hit
GTGTTAGCCAGAATGGTCTCAATCTCCAGACCTCGTGATCCGCCCGCCCT1110.15190497044011386No Hit
GCTTAAGATATTTATTCAATGCTCTCACATTTGGCCTCTGTGACCCAGAA1100.15053645719290562No Hit
GTATCAACGCAGAGTACATGGGAAACCTCATTTTTTTTGTTCCTTTTCTT1090.1491679439456974No Hit
GTCTTTTCCTGGCCAGAGGAAAGATTGATGGCCCTCCCACTTGAACTGAC1080.14779943069848916No Hit
TGTTATGGCTGATCAGTCATCCACCAGGAACGAAGATTTCCTGAAGAAGA1080.14779943069848916No Hit
GTGTGGGGCCTGTGGAAACTTTGACGGGGACCAGACCAATGATTGGCATG1040.14232537770965623No Hit
ATACATATCTATGTGAACGTTGTCAGCCTAGGAATTTGGATAAAGAGAGG1040.14232537770965623No Hit
GTATCAACGCAGAGTACATGGGGGTTGGAGAAAGGAGAGAAAGGAAAGCG1020.13958835121523977No Hit
CCTTTGATGGGGCCCGTGGTGCCACCACCTCTCCTGGTGTCTATGAGCTC1000.13685132472082331No Hit
GTCTCCGAGTGGATCTCCCAGCTGAGAAGTTAGCATCTGTGTCCGTGAGT1000.13685132472082331No Hit
TTTCTAGACTTTCATGTTTGTCTTTTTGTCTTCTGCTGGAAACATGCCGG980.13411429822640683No Hit
GCATATTCCTGATACATATCTATGTGAACGTTGTCAGCCTAGGAATTTGG980.13411429822640683No Hit
GAGTACATGGGAGGCCACCTTCCTTCTGGCAGGGACTCTTATTTATTCCC970.1327457849791986No Hit
TGTCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAG970.1327457849791986No Hit
ATATACAGATGCTCCCACTGATCACAGAGAGAATGTAGTTCTTAGATGGA970.1327457849791986No Hit
GTATCAACGCAGAGTACATGGGAAGGGCACAAGTCCTGGATGTTGTGTGT950.13000875848478213No Hit
GTATATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTG940.1286402452375739No Hit
GTATCAACGCAGAGTACATGGGCAATGGTCAGTCTTTTCCTGGCCAGAGG940.1286402452375739No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA940.1286402452375739No Hit
CACATACACTCTAGCTAAAAGAGCAAGAGTACACATCAACAAAAATGGAA910.1245347054959492No Hit
GTCCTGCGCTCTCCATTTCTCCATCGCTGGCTTCTCCTGGGAGTCATGCC910.1245347054959492No Hit
GTTGTGACAAATGCAGCGTTTGGCAACATATTGACTGCATGGGGATTGAT910.1245347054959492No Hit
GTACATGGGAGATGTCAACATAAAAAGCACAGAAAGAAAAGTTCGACAAC890.12179767900153274No Hit
GTGGGGGGTTTGACTTTATTTGAAATTTTTGGTAGATTGTTCATTTGGTT880.1204291657543245No Hit
ATACAATGATGTATTTCTTTATTTTCACATACACTCTAGCTAAAAGAGCA880.1204291657543245No Hit
CTCCAGAGGGACCAGGTCTTCTTCAGGAAATCTTCGTTCCTGGTGGATGA870.11906065250711627No Hit
GGACTACAGAATACCATCCCCTGGTACCGTGTAGTTGCCGAAGTCCAGAT850.11632362601269981No Hit
GTATCAACGCAGAGTACATGGGACACATGATGATGGATACATGATCTGTT850.11632362601269981No Hit
GCCTAGGAATTTGGATAAAGAGAGGGCAGTGCTACTACAACGCCGGAAAA830.11358659951828333No Hit
CTGTGGGGGGTTTGACTTTATTTGAAATTTTTGGTAGATTGTTCATTTGG820.11221808627107512No Hit
GAATACAATGATGTATTTCTTTATTTTCACATACACTCTAGCTAAAAGAG820.11221808627107512No Hit
GTATCAACGCAGAGTACATGGGAGGCCACCTTCCTTCTGGCAGGGACTCT820.11221808627107512No Hit
AAACAAGGGTGTGTGGGTGAATGGTCTCCGAGTGGATCTCCCAGCTGAGA810.11084957302386687No Hit
AGTCAAAACTGTTTATTAATATTTGGTGACAAAAGAACTTAAATTGACCG810.11084957302386687No Hit
AGGCAGCACTGTGGGGGGTTTGACTTTATTTGAAATTTTTGGTAGATTGT810.11084957302386687No Hit
GGTTTATAGCTGAGGAAAAGAAATTAAAAGAGAAGGAGAAATCCAACACA800.10948105977665863No Hit
GTCTGTGGGTGCCAACCTCACCACCTTTGATGGGGCCCGTGGTGCCACCA790.10811254652945042No Hit
GAGTACATGGGGAAGCCCGGAACTGCTGGGCCACCCGTGGTCTCTGTGTC790.10811254652945042No Hit
AACTTAAATTGACCGAAAATCAAAAGTTACATTGCCTTGGTACAGTGCGC780.10674403328224218No Hit
TGCTAGGAGAGAGAAATAAACAGAGTAGGTCTGGGCACCAGGTAAATGGG780.10674403328224218No Hit
GAGTACATGGGAAACCTCATTTTTTTTGTTCCTTTTCTTGTTACTTTTAA770.10537552003503393No Hit
GCACAGGGCGAAGCAGAGGCAAAGCGGCCCAGCCCAACAGCCGGGATGGG770.10537552003503393No Hit
AAGTAGAAGTTTACAAAGCTAACTTTCTTCTTGTCTAGCTATTAACATGA770.10537552003503393No Hit
GAGTACATGGGCAATGGTCAGTCTTTTCCTGGCCAGAGGAAAGATTGATG760.10400700678782569No Hit
GTGCTGGGAAGCGCCGCGGTGCAACCAGAAATGCACAGACCCAGCCGCCC750.10263849354061748No Hit
GGGCGAAGCAGAGGCAAAGCGGCCCAGCCCAACAGCCGGGATGGGGCAGG740.10126998029340924No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)