Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001421289 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 23332 | 0.5832999999999999 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 14913 | 0.37282499999999996 | No Hit |
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGT | 14839 | 0.370975 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 11552 | 0.2888 | No Hit |
ATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTCTT | 6762 | 0.16905 | TruSeq Adapter, Index 10 (95% over 21bp) |
ACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTCTTCT | 4830 | 0.12075 | RNA PCR Primer, Index 10 (95% over 23bp) |