Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001421673 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 37091 | 0.927275 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 23228 | 0.5807 | No Hit |
CTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGT | 20323 | 0.508075 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 16360 | 0.409 | No Hit |
ATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTT | 7770 | 0.19425 | RNA PCR Primer, Index 39 (95% over 23bp) |
ACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTTCT | 4909 | 0.122725 | RNA PCR Primer, Index 39 (96% over 25bp) |