FastQCFastQC Report
Fri 9 Sep 2022
EGAF00001421680

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001421680
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1650495
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA230531.3967324954028943No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA59930.36310319025504467No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)