FastQCFastQC Report
Tue 24 Jan 2023
EGAF00001430455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001430455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences203448914
Sequences flagged as poor quality0
Sequence length101
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN54981072.702450896346392No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)