FastQCFastQC Report
Wed 25 Jan 2023
EGAF00001432762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001432762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199948565
Sequences flagged as poor quality0
Sequence length101
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN64648913.2332770180171084No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)