FastQCFastQC Report
Wed 22 Mar 2023
EGAF00001433550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001433550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55243161
Sequences flagged as poor quality0
Sequence length100
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGTTGTCGTATTTTGTAAAGTGCTACAAGGATTCGATTGGATTTGCTG1287210.23300802790774408No Hit
AAGGTTGTCGTATTTCGTAAAGTGCCACTGTGATTCGATTGGATTTGCTG716740.12974275675499453No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)