FastQCFastQC Report
Wed 22 Mar 2023
EGAF00001433558

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001433558
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54791481
Sequences flagged as poor quality0
Sequence length100
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGTTGTCGTATTTTGTAAAGTGCTACAAGGATTCGATTGGATTTGCTG1284800.23448900751560264No Hit
AAGGTTGTCGTATTTCGTAAAGTGCCACTGTGATTCGATTGGATTTGCTG724430.13221580924231635No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)