FastQCFastQC Report
Fri 31 Mar 2023
EGAF00001434463

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001434463
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31082882
Sequences flagged as poor quality0
Sequence length101
%GC6

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3591941.1556006936551122No Hit
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA334620.10765411006611293No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)