FastQCFastQC Report
Sun 14 May 2023
EGAF00001441885

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001441885
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65015470
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGG1233550.18973176691639698No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA908800.13978211647166436No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)