FastQCFastQC Report
Mon 7 Nov 2022
EGAF00001551952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001551952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences689873473
Sequences flagged as poor quality0
Sequence length126
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGAAAATCTCGTATGC8873270.12862170162034917TruSeq Adapter, Index 19 (98% over 50bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)