FastQCFastQC Report
Fri 6 Jan 2023
EGAF00001552001

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001552001
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69719183
Sequences flagged as poor quality0
Sequence length76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2438620.34977747802925346No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGG705120.10113715761700766No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)