FastQCFastQC Report
Fri 24 Mar 2023
EGAF00001561234

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001561234
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63128119
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACTCTTTCCCTACACGACGCTCTTCCGATCTACACTCTTTCCCTACAC2606560.41289999469174743Illumina Single End PCR Primer 1 (100% over 33bp)
GGATATCTGGGTAGTAACGGGATACTAGGTAGTGGTTTGGGTGGAGAATA633460.100345140966421No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)