FastQCFastQC Report
Wed 14 Sep 2022
EGAF00001561423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001561423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17001507
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGAAGACAAGTCCTCCACCTAAACCATGTCCTCCATCCAAACCATGT1472530.86611733889237No Hit
GATATCTGGGTAGTAACGGGATACTAGGTAGTGGTTTGGGTGGAGAATAG936540.5508570504955825No Hit
GATATCACACAACCACTCAACCCATTTCCCCTACCTAAACCATGCCCGCC459350.2701819315193647No Hit
CAATGGTCTCCACCTAAACCGTGTTCTCCACCCAAACCGTGTCGTCCACC324480.19085366961881675No Hit
GGATATCTGGGTAGTAACGGGATACTAGGTAGTGGTTTGGGTGGAGAATA254100.1494573392817472No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)