FastQCFastQC Report
Thu 16 Mar 2023
EGAF00001561424

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001561424
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80720378
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGAAGACAAGTCCTCCACCTAAACCATGTCCTCCATCCAAACCATGT1962310.24309970401773887No Hit
GATATCTGGGTAGTAACGGGATACTAGGTAGTGGTTTGGGTGGAGAATAG1784190.2210334049724098No Hit
GATATCACACAACCACTCAACCCATTTCCCCTACCTAAACCATGCCCGCC923610.1144209210715044No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)