FastQCFastQC Report
Mon 27 Mar 2023
EGAF00001570861

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001570861
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82672433
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGCTCGACATCTCGTAT3755050.4542082364988581TruSeq Adapter, Index 11 (97% over 37bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)