FastQCFastQC Report
Tue 13 Dec 2022
EGAF00001595212

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001595212
File typeColorspace converted to bases
EncodingSanger / Illumina 1.9
Total Sequences834502946
Sequences flagged as poor quality0
Sequence length35-50
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN11853880.14204719176629488No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)