FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001604232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001604232
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3033622
Sequences flagged as poor quality0
Sequence length151
%GC49

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG40140.13231707839671522No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA36920.12170270389653029No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT34160.11260466861065749No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)