FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001604284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001604284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3053610
Sequences flagged as poor quality0
Sequence length151
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTC34390.1126207996437004No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT32340.10590743415170897No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA31690.1037788060688824No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)