FastQCFastQC Report
Fri 9 Sep 2022
EGAF00001604745

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001604745
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1869852
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT27330.146161300466561No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG23580.12610623728508996No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA21540.11519628291436969No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)