FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001604935

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001604935
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2009624
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT373551.858805428279121No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT145610.724563400914798No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT85390.4249053554296724No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT73420.3653419744190953No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT66770.33225120719099693No Hit
AACCAGACATGGGGGAAATCGCCAGCTTCGATAAGGCCAAGCTGAAGAAA53690.26716440488369964No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT42080.20939240375313992No Hit
GATTAGTGGAGGGGTCCCCTTCAGAGACCCACAGGCCGGTGGCATCGGCG25250.12564539436232847No Hit
GATTAGTGGAGGGGTCCCCTTCAGAGACCCGCGGGCCGGTGGCATCGGCT24580.12231143736340729No Hit
CCTCCCTACGAGAACATGCCTCTCGCAAAGGATCTCCTTCATCCCTCTCC20250.1007651182509763No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)